Basic Information
Locus ID:
populus_peu16493
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
AMSH-like ubiquitin thioesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 18322298 | 18326326 | + | populus_peu16493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 19,081.17 Da | 55.48 | 68.51 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 1 | 168 | 4.22606E-93 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 3 | 98 | 6.0E-14 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 2 | 125 | 5.49E-20 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 1 | 168 | 5.7E-64 | - |
| SMART | SM00232 | pad1_6 | 1 | 121 | 4.2E-9 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 1 | 122 | 26.991018 | IPR037518 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10600.1 | associated molecule with the SH3 domain of STAM 2. | 0 |
| RefSeq | XP_011009553.1 | PREDICTED: AMSH-like ubiquitin thioesterase 2 isoform X2 [Populus euphratica] | 0 |
| Q6NKP9 | AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2XSV6 | MPN domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_018460 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology