Basic Information
Locus ID:
populus_peu16421
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 16521348 | 16532533 | + | populus_peu16421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 67,251.76 Da | 32.92 | 93.96 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 321 | 582 | 6.07608E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 317 | 582 | 6.7E-46 | IPR000719 |
| Pfam | PF01476 | LysM domain | 169 | 194 | 0.023 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 296 | 585 | 3.1E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 597 | 3.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 300 | 385 | 7.1E-27 | - |
| SMART | SM00220 | serkin_6 | 315 | 587 | 2.6E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 315 | 588 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 321 | 343 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 430 | 442 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_011007196.1 | PREDICTED: chitin elicitor receptor kinase 1-like isoform X1 [Populus euphratica] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2BMW1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G226600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology