Basic Information
Locus ID:
populus_peu16106
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 4741979 | 4742950 | - | populus_peu16106 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 16,711.26 Da | 41.46 | 93.10 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 122 | 2.28107E-45 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 114 | 4.5E-21 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 123 | 5.62E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 126 | 7.9E-32 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 124 | 36.018936 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_002319707.4 | blue copper protein [Populus trichocarpa] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1Y1R3 | Phytocyanin domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G061300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology