Basic Information
Locus ID:
populus_peu16092
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 4612785 | 4616155 | + | populus_peu16092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 89,437.17 Da | 31.76 | 91.96 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 514 | 786 | 2.24177E-85 | - |
| CDD | cd00028 | B_lectin | 58 | 160 | 4.39283E-20 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 512 | 782 | 6.7E-52 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 88 | 175 | 9.0E-15 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 257 | 327 | 5.6E-8 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 487 | 785 | 5.33E-77 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 75 | 215 | 1.66E-21 | IPR036426 |
| Gene3D | G3DSA:2.90.10.30 | - | 160 | 295 | 9.8E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 490 | 586 | 6.8E-28 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 34 | 158 | 9.0E-16 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 587 | 792 | 9.6E-59 | - |
| SMART | SM00108 | blect_4 | 47 | 160 | 4.4E-19 | IPR001480 |
| SMART | SM00220 | serkin_6 | 508 | 784 | 3.3E-37 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 10 | 800 | 9.5E-191 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 508 | 796 | 36.979504 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 41 | 158 | 11.903598 | IPR001480 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 293 | 331 | 8.51197 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 630 | 642 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 514 | 540 | - | IPR017441 |
| Coils | Coil | Coil | 531 | 551 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60900.1 | receptor-like protein kinase 1. Encodes a receptor-like protein kinase. | 0 |
| RefSeq | XP_002319170.2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 [Populus trichocarpa] | 0 |
| Q25AG2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2K1Y1P6 | Receptor-like serine/threonine-protein kinase OS=Populus trichocarpa OX=3694 GN=POPTR_013G059900 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology