Basic Information
Locus ID:
populus_peu16000
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 3663574 | 3667344 | - | populus_peu16000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 111,852.95 Da | 33.52 | 101.33 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 710 | 979 | 2.0E-49 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 72 | 1.1E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 532 | 591 | 4.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 226 | 589 | 2.12E-71 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 309 | 1.7E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 983 | 1.78E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 707 | 790 | 7.5E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 147 | 1.1E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 1007 | 9.0E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 315 | 627 | 1.2E-87 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 314 | 1.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 254 | 2.2E-30 | IPR032675 |
| SMART | SM00220 | serkin_6 | 708 | 983 | 2.6E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 81.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 998 | 39.396416 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 714 | 738 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 999 | 1017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1017 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_011038464.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase PXL1 [Populus euphratica] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9I5Q8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G048800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology