Basic Information
Locus ID:
populus_peu15894
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
NEK1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2706844 | 2712346 | - | populus_peu15894 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 61,594.84 Da | 49.84 | 79.24 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 2.14498E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 8.5E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 298 | 1.03E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 275 | 6.7E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 3.6E-22 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 4.3E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 44.795605 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_011005708.1 | PREDICTED: serine/threonine-protein kinase Nek1-like isoform X2 [Populus euphratica] | 0 |
| Q9SLI2 | Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K1Y0N6 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G039000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology