Basic Information
Locus ID:
populus_peu15866
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2442654 | 2446284 | - | populus_peu15866 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 99,570.58 Da | 36.51 | 88.69 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 579 | 852 | 8.82395E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 58 | 2.5E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 326 | 358 | 0.055 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 576 | 844 | 2.8E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 109 | 171 | 9.1E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 363 | 422 | 2.1E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 435 | 9.35E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 563 | 873 | 2.21E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 316 | 1.5E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 444 | 4.0E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 537 | 650 | 6.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 651 | 875 | 2.3E-56 | - |
| SMART | SM00220 | serkin_6 | 573 | 853 | 3.3E-41 | IPR000719 |
| SMART | SM00364 | LRR_bac_2 | 385 | 405 | 580.0 | - |
| SMART | SM00364 | LRR_bac_2 | 85 | 105 | 30.0 | - |
| SMART | SM00369 | LRR_typ_2 | 409 | 435 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 385 | 408 | 19.0 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 182 | 202 | 300.0 | - |
| SMART | SM00364 | LRR_bac_2 | 409 | 429 | 9.7 | - |
| SMART | SM00369 | LRR_typ_2 | 108 | 131 | 3.2E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 205 | 5.2 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 87 | 109 | 7.134402 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 573 | 853 | 40.173786 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 579 | 601 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 698 | 710 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 885 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 469 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011005684.1 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1Y0I8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G035900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology