Basic Information
Locus ID:
populus_peu15798
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1917135 | 1920243 | - | populus_peu15798 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 104,368.23 Da | 43.50 | 103.41 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 165 | 397 | 6.7E-48 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 162 | 409 | 2.85E-48 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 470 | 831 | 4.93E-23 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 310 | 399 | 1.6E-19 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 909 | 8.8E-27 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 309 | 7.4E-29 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 178 | 193 | 3.0E-23 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 251 | 265 | 3.0E-23 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 344 | 358 | 3.0E-23 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 609 | 625 | 3.0E-23 | - |
| Coils | Coil | Coil | 35 | 62 | - | - |
| Coils | Coil | Coil | 824 | 844 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_011023525.1 | PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1Y041 | NB-ARC domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G027300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology