Basic Information
Locus ID:
populus_peu15557
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
ribosome-inactivating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 316652 | 317476 | + | populus_peu15557 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 31,781.43 Da | 35.24 | 92.12 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 27 | 227 | 1.9E-29 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 23 | 271 | 4.19E-35 | IPR036041 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 16 | 194 | 3.2E-32 | IPR016138 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 183 | 203 | 2.5E-6 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 26 | 39 | 2.5E-6 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 73 | 88 | 2.5E-6 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 216 | 233 | 2.5E-6 | IPR017989 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052195019.1 | uncharacterized protein LOC127803052 [Diospyros lotus] | 0 |
| TrEMBL | A0A8X8CDF6 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_044838 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology