Basic Information
Locus ID:
populus_peu15370
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 33535633 | 33539800 | - | populus_peu15370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 105,999.13 Da | 30.43 | 104.69 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 286 | 307 | 1.6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 573 | 591 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 64 | 6.1E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 502 | 560 | 1.4E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 684 | 957 | 5.7E-44 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 382 | 610 | 2.95E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 959 | 1.62E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 71 | 418 | 2.67E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 137 | 2.2E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 761 | 967 | 1.2E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 326 | 1.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 623 | 1.5E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 648 | 760 | 8.3E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 222 | 8.2E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 475 | 499 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 547 | 569 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 596 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 360.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 959 | 1.7E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 284 | 307 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 163 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 960 | 37.304585 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 805 | 817 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 550 | 563 | 8.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 571 | 584 | 8.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_011045060.1 | PREDICTED: receptor protein kinase CLAVATA1-like [Populus euphratica] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | B9H500 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G241500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology