Basic Information
Locus ID:
populus_peu15272
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 32778761 | 32781761 | - | populus_peu15272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 71,037.26 Da | 35.69 | 67.29 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 25 | 154 | 2.28E-47 | IPR033734 |
| CDD | cd09612 | Jacalin | 304 | 433 | 1.60672E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 501 | 632 | 6.00198E-41 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 304 | 433 | 1.0E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 500 | 632 | 1.0E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 25 | 155 | 8.7E-32 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 14 | 155 | 7.72E-45 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 489 | 631 | 2.88E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 294 | 433 | 4.45E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 484 | 632 | 1.6E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 279 | 433 | 1.3E-48 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 153 | 2.0E-56 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 500 | 633 | 1.7E-39 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 25 | 155 | 3.0E-43 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 304 | 435 | 4.3E-37 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 489 | 633 | 48.338337 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 293 | 435 | 49.135567 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 14 | 155 | 53.525036 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 236 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_011048832.1 | PREDICTED: jacalin-related lectin 3-like isoform X1 [Populus euphratica] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2YWW8 | Jacalin-related lectin 3 OS=Populus deltoides OX=3696 GN=H0E87_011314 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology