Basic Information
Locus ID:
populus_peu15127
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 31674658 | 31678473 | + | populus_peu15127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 26,257.63 Da | 35.39 | 61.69 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 34 | 226 | 1.4E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 108 | 216 | 1.28E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 114 | 229 | 1.0E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 117 | 217 | 22.854446 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_011042427.1 | PREDICTED: auxin-induced protein AUX28-like [Populus euphratica] | 0 |
| P13089 | Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1 | 0 | |
| TrEMBL | U5GD65 | Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G218300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology