Basic Information
Locus ID:
populus_peu15073
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 31204499 | 31209780 | - | populus_peu15073 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 38,269.67 Da | 38.41 | 87.26 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 33 | 339 | 1.7E-79 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 27 | 346 | 2.49E-86 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 21 | 339 | 5.2E-105 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 298 | 349 | 0.25 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 23 | 220 | 9.6E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 20 | 341 | 47.985699 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_011032656.1 | PREDICTED: homocysteine S-methyltransferase 2-like [Populus euphratica] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8D3G2 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_019866 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology