Basic Information
Locus ID:
populus_peu14855
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 29245603 | 29247980 | - | populus_peu14855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 74,292.15 Da | 39.71 | 89.41 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 15 | 249 | 6.3764E-72 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 15 | 252 | 3.0E-52 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 357 | 619 | 7.6E-43 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 10 | 249 | 2.33E-53 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 623 | 4.59E-70 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 11 | 258 | 5.2E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 431 | 5.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 628 | 4.5E-56 | - |
| SMART | SM00220 | serkin_6 | 354 | 623 | 1.3E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 633 | 35.156216 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 360 | 382 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 134 | 140 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010999803.1 | PREDICTED: L-type lectin-domain containing receptor kinase S.6 [Populus euphratica] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | B9H7Q0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G189500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology