Basic Information
Locus ID:
populus_peu14487
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 19000398 | 19003986 | - | populus_peu14487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 66,617.35 Da | 45.39 | 92.00 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 21 | 123 | 4.05911E-46 | - |
| Pfam | PF03000 | NPH3 family | 210 | 259 | 8.3E-13 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 28 | 116 | 2.8E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 271 | 439 | 2.5E-61 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 115 | 2.12E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 118 | 7.3E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 143 | 463 | 59.018826 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 96 | 10.323363 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 582 | - | - |
| Coils | Coil | Coil | 279 | 299 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37590.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_011011590.1 | PREDICTED: BTB/POZ domain-containing protein NPY4-like [Populus euphratica] | 0 |
| Q0WL52 | Phototropic-responsive NPH3 family protein NPY5 OS=Arabidopsis thaliana OX=3702 GN=NPY5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T2YTU8 | Phototropic-responsive NPH3 family protein OS=Populus deltoides OX=3696 GN=H0E87_010629 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology