Basic Information
Locus ID:
populus_peu14330
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12298961 | 12300377 | + | populus_peu14330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.13 | 23,162.15 Da | 56.35 | 57.99 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 144 | 212 | 1.96E-10 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 144 | 214 | 5.6E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 214 | 10.67613 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 159 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_011007668.1 | PREDICTED: CDPK-related kinase 5-like [Populus euphratica] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | B9H6E4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G135900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah026154 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000031586 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G001000 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr12G025550, Chr20G005450 |
| Poaceae | Thinopyrum elongatum | 6 | Tel3E01G186100, Tel3E01G532600, Tel3E01G837000 ... |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG076670 |
| Poaceae | Zea mays | 3 | Zm00001eb092830_P001, Zm00001eb180840_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-54473, nbis-gene-9572 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12207 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5699 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011417 |
| Salicaceae | Populus euphratica | 1 | populus_peu14330 |