Basic Information
Locus ID:
populus_peu14300
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 11387203 | 11389798 | + | populus_peu14300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 64,579.62 Da | 49.55 | 85.82 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 233 | 277 | 0.0014 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 426 | 583 | 2.0E-32 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 583 | 2.19E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 584 | 2.8E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 463 | 2.1E-15 | - |
| SMART | SM00220 | serkin_6 | 405 | 584 | 3.8E-8 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 231 | 276 | 9.966098 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 165 | 211 | 8.571506 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 584 | 28.824186 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 307 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_011009881.1 | PREDICTED: lysM domain receptor-like kinase 4 [Populus euphratica] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | U5GFJ5 | LysM domain receptor-like kinase 4 OS=Populus trichocarpa OX=3694 GN=POPTR_005G128200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology