Basic Information
Locus ID:
populus_peu14292
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 11151071 | 11153668 | - | populus_peu14292 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 69,987.31 Da | 47.86 | 90.80 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 186 | 230 | 0.0016 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 376 | 617 | 1.3E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 618 | 7.06E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 627 | 1.7E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 416 | 2.8E-15 | - |
| SMART | SM00220 | serkin_6 | 358 | 622 | 1.1E-22 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 118 | 164 | 8.571506 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 184 | 229 | 9.966098 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 289 | 622 | 32.47076 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 260 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_011009881.1 | PREDICTED: lysM domain receptor-like kinase 4 [Populus euphratica] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | U5GFJ5 | LysM domain receptor-like kinase 4 OS=Populus trichocarpa OX=3694 GN=POPTR_005G128200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology