Basic Information
Locus ID:
populus_peu13961
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7063812 | 7074298 | - | populus_peu13961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 125,752.15 Da | 43.45 | 73.99 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 854 | 1111 | 4.44527E-112 | - |
| CDD | cd06410 | PB1_UP2 | 158 | 221 | 3.58269E-28 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 849 | 1111 | 2.4E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 168 | 221 | 5.4E-9 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 165 | 221 | 8.04E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 839 | 1111 | 5.68E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 936 | 1128 | 1.5E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 841 | 935 | 1.0E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 170 | 223 | 6.4E-5 | - |
| SMART | SM00220 | serkin_6 | 848 | 1114 | 1.6E-55 | IPR000719 |
| SMART | SM00666 | PB1_new | 164 | 248 | 2.6E-10 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 848 | 1113 | 40.725014 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 854 | 875 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 973 | 985 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1082 | 1104 | 5.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1038 | 1060 | 5.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 967 | 985 | 5.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 930 | 943 | 5.0E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011022081.1 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105123973 [Populus euphratica] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YSS9 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_010236 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology