Basic Information
Locus ID:
populus_peu13642
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3945265 | 3952580 | - | populus_peu13642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 186,710.22 Da | 43.51 | 100.95 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 164 | 397 | 2.1E-45 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 470 | 851 | 2.62E-26 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 152 | 411 | 2.6E-48 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 933 | 1062 | 2.67E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1123 | 1614 | 5.44E-14 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 150 | 303 | 2.6E-28 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1082 | 1291 | 3.1E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 310 | 399 | 3.9E-19 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 913 | 1081 | 4.6E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1321 | 1629 | 5.6E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 502 | 896 | 9.6E-28 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 600 | 616 | 6.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 178 | 193 | 6.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 251 | 265 | 6.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 344 | 358 | 6.0E-18 | - |
| Coils | Coil | Coil | 74 | 94 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_011007552.1 | PREDICTED: uncharacterized protein LOC105113187 isoform X2 [Populus euphratica] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3N7EY70 | NB-ARC domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G061860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology