Basic Information
Locus ID:
populus_peu13641
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3936797 | 3944980 | - | populus_peu13641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 103,789.73 Da | 49.53 | 84.81 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01196 | Ribosomal protein L17 | 779 | 872 | 7.9E-30 | IPR000456 |
| SUPERFAMILY | SSF64263 | Prokaryotic ribosomal protein L17 | 774 | 875 | 2.35E-35 | IPR036373 |
| SUPERFAMILY | SSF52047 | RNI-like | 36 | 293 | 3.69E-10 | - |
| Gene3D | G3DSA:3.90.1030.10 | Ribosomal protein L17 | 767 | 872 | 4.2E-36 | IPR036373 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 231 | 7.5E-9 | IPR032675 |
| TIGRFAM | TIGR00059 | L17: ribosomal protein bL17 | 779 | 873 | 4.3E-32 | IPR000456 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 919 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 876 | 919 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 414 | - | - |
| Coils | Coil | Coil | 673 | 700 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09770.1 | Ribosomal protein L17 family protein. | 0 |
| RefSeq | XP_011007551.1 | PREDICTED: uncharacterized protein LOC105113187 isoform X1 [Populus euphratica] | 0 |
| A0L5Z9 | Large ribosomal subunit protein bL17 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=rplQ PE=3 SV=1 | 0 | |
| TrEMBL | A0A4U5NA93 | NB-ARC domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000273110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology