Basic Information
Locus ID:
populus_peu13586
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3455799 | 3458084 | + | populus_peu13586 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 18,760.87 Da | 21.68 | 60.58 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 20 | 173 | 1.4E-43 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 122 | 173 | 2.75E-6 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 126 | 174 | 4.9E-15 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 131 | 174 | 13.276991 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 100 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_011032399.1 | PREDICTED: auxin-responsive protein IAA16-like [Populus euphratica] | 0 |
| P13089 | Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1 | 0 | |
| TrEMBL | Q8LSK7 | Auxin-responsive protein OS=Populus tremula x Populus tremuloides OX=47664 GN=IAA1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology