Basic Information
Locus ID:
populus_peu13537
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3133164 | 3136459 | - | populus_peu13537 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 94,980.75 Da | 42.71 | 89.36 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 535 | 807 | 4.70413E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 534 | 802 | 2.4E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 59 | 6.7E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 327 | 337 | 40.0 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 110 | 172 | 4.2E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 518 | 831 | 8.23E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 304 | 1.11E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 326 | 409 | 1.81E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 422 | 7.7E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 497 | 605 | 6.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 606 | 831 | 1.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 308 | 3.4E-64 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 86 | 108 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 364 | 388 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 0.12 | IPR003591 |
| SMART | SM00220 | serkin_6 | 528 | 808 | 3.3E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 528 | 808 | 40.937023 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 366 | 389 | 7.088198 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 653 | 665 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011032474.1 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YQN5 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_009861 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology