Basic Information
Locus ID:
populus_peu13472
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2668657 | 2677164 | + | populus_peu13472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 164,663.98 Da | 45.17 | 104.32 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 141 | 276 | 1.9E-23 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 391 | 882 | 4.08E-17 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 141 | 335 | 1.17E-19 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 932 | 1121 | 1.18E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 687 | 893 | 9.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 934 | 1141 | 1.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1145 | 1386 | 1.4E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 435 | 660 | 5.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 141 | 260 | 1.0E-14 | IPR027417 |
| Coils | Coil | Coil | 361 | 381 | - | - |
| Coils | Coil | Coil | 34 | 82 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27220.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_011048886.1 | PREDICTED: probable disease resistance protein At4g27220 [Populus euphratica] | 0 |
| O81825 | Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana OX=3702 GN=At4g27220 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2ABD9 | AAA domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G042400 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology