Basic Information
Locus ID:
populus_peu13320
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 1621335 | 1627361 | + | populus_peu13320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 109,227.55 Da | 52.73 | 72.08 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 48 | 167 | 3.6E-15 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 430 | 624 | 1.3E-47 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 628 | 678 | 3.6E-14 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 403 | 713 | 1.25E-77 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 50 | 181 | 2.52E-25 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 630 | 708 | 1.8E-18 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 347 | 629 | 5.2E-66 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 38 | 167 | 1.4E-29 | IPR036872 |
| SMART | SM00033 | ch_5 | 47 | 165 | 1.4E-13 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 401 | 687 | 1.7E-86 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 633 | 679 | 18.07938 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 45 | 167 | 19.589178 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 403 | 625 | 52.818638 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 629 | 650 | 6.2E-19 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 477 | 498 | 6.2E-19 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 728 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 878 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 895 | 942 | - | - |
| Coils | Coil | Coil | 261 | 281 | - | - |
| Coils | Coil | Coil | 686 | 713 | - | - |
| Coils | Coil | Coil | 383 | 403 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27000.1 | kinesin 4. Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. | 0 |
| RefSeq | XP_011036919.1 | PREDICTED: kinesin-4-like [Populus euphratica] | 0 |
| O81635 | Kinesin-like protein KIN-14G OS=Arabidopsis thaliana OX=3702 GN=KIN14G PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K2AAG8 | Kinesin-4 OS=Populus trichocarpa OX=3694 GN=POPTR_005G021100 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology