Basic Information
Locus ID:
populus_peu12982
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 36631732 | 36632925 | + | populus_peu12982 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 41,175.74 Da | 34.52 | 77.37 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 29 | 366 | 4.47449E-131 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 35 | 360 | 2.3E-70 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 267 | 331 | 1.44E-10 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 32 | 361 | 9.07E-67 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 266 | 331 | 3.6E-94 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 43 | 360 | 3.6E-94 | - |
| SMART | SM00636 | 2g34 | 31 | 360 | 2.9E-84 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 31 | 372 | 62.473679 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 138 | 146 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_011039726.1 | PREDICTED: acidic mammalian chitinase-like [Populus euphratica] | 0 |
| A0A072VEP0 | Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YGE7 | GH18 domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_011689 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology