Basic Information
Locus ID:
populus_peu12810
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 35336080 | 35338816 | - | populus_peu12810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 33,511.51 Da | 59.43 | 81.52 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 167 | 248 | 6.0E-19 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 164 | 238 | 1.57E-16 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 239 | 281 | 6.54E-15 | IPR037275 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 160 | 236 | 25.734354 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 238 | 289 | 24.993982 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25560.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_011019697.1 | PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Populus euphratica] | 0 |
| Q5JL96 | Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica OX=39947 GN=RZFP34 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8CR79 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_024151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology