Basic Information
Locus ID:
populus_peu12390
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 31334403 | 31343027 | - | populus_peu12390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 107,370.93 Da | 47.63 | 80.18 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 769 | 939 | 1.71848E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 347 | 938 | 5.1E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 345 | 941 | 4.58E-105 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 342 | 571 | 9.7E-68 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 692 | 942 | 4.4E-53 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 347 | 941 | 54.823524 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 884 | 901 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 348 | 363 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 722 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_011046445.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Populus euphratica] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T2YI71 | Ubiquitin carboxyl-terminal hydrolase OS=Populus deltoides OX=3696 GN=H0E87_012186 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology