Basic Information
Locus ID:
populus_peu12354
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30968771 | 30969784 | + | populus_peu12354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 30,586.11 Da | 41.92 | 71.74 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 37 | 1.2E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 112 | 149 | 1.6E-9 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 104 | 198 | 2.09E-12 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 60 | 8.9E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 45 | 2.0E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 69 | 263 | 1.0E-14 | IPR015915 |
| SMART | SM00612 | kelc_smart | 115 | 162 | 5.0E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011047101.1 | PREDICTED: F-box/kelch-repeat protein At1g15670-like [Populus euphratica] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X8CP36 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_025948 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology