Basic Information
Locus ID:
populus_peu12325
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30563013 | 30563945 | - | populus_peu12325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 28,780.88 Da | 46.31 | 64.78 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 55 | 163 | 5.8E-36 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 91 | 163 | 1.2E-22 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 53 | 88 | 1.4E-7 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 220 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_011005304.1 | PREDICTED: ubiquitin fusion degradation protein 1 homolog [Populus euphratica] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | U5G8F8 | Ubiquitin fusion degradation protein 1 OS=Populus trichocarpa OX=3694 GN=POPTR_006G194300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology