Basic Information
Locus ID:
populus_peu12263
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 29639038 | 29644592 | + | populus_peu12263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 37,756.57 Da | 28.68 | 75.34 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 2 | 295 | 1.59951E-128 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 11 | 289 | 1.2E-74 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 195 | 260 | 3.4E-11 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 9 | 293 | 2.0E-62 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 10 | 291 | 3.9E-103 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 194 | 260 | 3.9E-103 | IPR029070 |
| SMART | SM00636 | 2g34 | 1 | 289 | 8.7E-77 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 311 | 59.466446 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_011033474.1 | PREDICTED: chitotriosidase-1-like [Populus euphratica] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | H6WS87 | Chitinase 3 OS=Populus canadensis OX=3690 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology