Basic Information
Locus ID:
populus_peu12255
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 29567783 | 29570386 | - | populus_peu12255 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 52,137.52 Da | 34.65 | 90.63 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 34 | 332 | 1.45762E-165 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 41 | 326 | 7.1E-7 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 33 | 332 | 4.97E-41 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 350 | 427 | 7.33E-5 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 33 | 333 | 3.2E-35 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 34 | 333 | 24.674612 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58050.1 | SHV3-like 4. | 0 |
| RefSeq | XP_011033465.1 | PREDICTED: glycerophosphodiester phosphodiesterase GDPDL6-like [Populus euphratica] | 0 |
| Q9FGT9 | Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 GN=GDPDL6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2YIM4 | glycerophosphodiester phosphodiesterase OS=Populus deltoides OX=3696 GN=H0E87_012293 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology