Basic Information
Locus ID:
populus_peu12188
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28465603 | 28470769 | + | populus_peu12188 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 70,199.52 Da | 36.80 | 96.29 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 297 | 561 | 1.6E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 5.1E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 176 | 1.8E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 564 | 5.26E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 197 | 1.79E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 207 | 2.6E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 263 | 370 | 1.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 371 | 581 | 2.0E-60 | - |
| SMART | SM00220 | serkin_6 | 294 | 563 | 1.6E-33 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 117 | 138 | 7.242212 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 573 | 35.099682 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 300 | 322 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 163 | 176 | 7.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 118 | 131 | 7.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 621 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011033358.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Populus euphratica] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YIV5 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_012358 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology