Basic Information
Locus ID:
populus_peu12000
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 21287923 | 21291274 | - | populus_peu12000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 70,522.33 Da | 41.76 | 81.67 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 271 | 524 | 1.6E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 249 | 527 | 3.7E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 345 | 549 | 4.6E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 241 | 343 | 1.5E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 4 | 143 | 2.1E-6 | IPR014729 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 268 | 529 | 27.594528 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56790.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011035034.1 | PREDICTED: probable receptor-like protein kinase At5g56460 [Populus euphratica] | 0 |
| Q9SFX0 | Probable serine/threonine-protein kinase PBL22 OS=Arabidopsis thaliana OX=3702 GN=PBL22 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8DFS4 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_005289 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1471 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168650 |
| Apiaceae | Apium graveolens | 4 | Ag10G02206, Ag11G04546, Ag2G00801, Ag9G01854 |
| Arecaceae | Cocos nucifera | 1 | scaffold000460G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697818 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.288.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G18457, Ftri17G12801, Ftri6G19474 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0955 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0954 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000158 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.210 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-28373, nbisL1-mrna-7221 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13228 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-7688, nbisL1-mrna-7689, nbisL1-mrna-7690 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000023l.272 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018787 |
| Salicaceae | Populus euphratica | 2 | populus_peu04171, populus_peu12000 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644359 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107025325 |