Basic Information
Locus ID:
populus_peu11736
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12520435 | 12524110 | - | populus_peu11736 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 69,226.83 Da | 39.05 | 68.28 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 260 | 346 | 2.261E-25 | - |
| Pfam | PF00855 | PWWP domain | 261 | 345 | 2.7E-15 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 259 | 379 | 1.02E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 248 | 353 | 1.1E-23 | - |
| SMART | SM00293 | PWWP_4 | 260 | 321 | 9.9E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 262 | 323 | 15.023396 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 592 | 618 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_011004163.1 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105110721 [Populus euphratica] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YKN3 | PWWP domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_012714 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology