Basic Information
Locus ID:
populus_peu11713
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12318276 | 12320424 | + | populus_peu11713 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 71,812.68 Da | 36.94 | 91.20 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 49 | 258 | 9.0758E-72 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 34 | 266 | 6.2E-62 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 447 | 608 | 4.2E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 368 | 643 | 6.15E-58 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 267 | 5.13E-64 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 366 | 443 | 4.2E-16 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 276 | 5.2E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 444 | 618 | 7.2E-36 | - |
| SMART | SM00220 | serkin_6 | 386 | 611 | 9.7E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 318 | 620 | 22.096401 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 147 | 153 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 392 | 415 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 457 | 469 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 305 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011016637.1 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Populus euphratica] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3N7F8F4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G130000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology