Basic Information
Locus ID:
populus_peu11601
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 10747939 | 10755414 | + | populus_peu11601 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 45,042.12 Da | 33.39 | 76.30 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 44 | 376 | 2.62198E-124 | - |
| Pfam | PF00069 | Protein kinase domain | 321 | 376 | 3.4E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 55 | 195 | 1.2E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 376 | 4.93E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 321 | 376 | 6.2E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 140 | 7.5E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 197 | 7.5E-63 | - |
| SMART | SM00220 | serkin_6 | 55 | 398 | 5.7E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 400 | 23.679409 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 182 | 194 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 262 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_011018860.1 | PREDICTED: SRSF protein kinase 2-like isoform X1 [Populus euphratica] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5QS51 | SRSF protein kinase 2-like isoform X1 OS=Populus alba OX=43335 GN=D5086_0000055420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology