Basic Information
Locus ID:
populus_peu11401
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Mitogen-activated protein kinase-binding protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 8671342 | 8680910 | + | populus_peu11401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 139,403.27 Da | 44.24 | 80.00 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 68 | 104 | 0.15 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 111 | 144 | 0.0027 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 153 | 186 | 0.0045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 385 | 427 | 0.059 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 700 | 731 | 0.2 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 471 | 731 | 2.93E-41 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 533 | 5.86E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 247 | 449 | 1.2E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 450 | 606 | 2.8E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 32 | 242 | 5.7E-37 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 607 | 751 | 1.0E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 107 | 144 | 9.6E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 692 | 731 | 1.8E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 460 | 499 | 5.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 501 | 554 | 0.91 | IPR001680 |
| SMART | SM00320 | WD40_4 | 558 | 597 | 0.012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 601 | 645 | 3.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 262 | 297 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 387 | 427 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 61 | 104 | 2.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 648 | 689 | 9.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 331 | 365 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 147 | 187 | 0.043 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 699 | 740 | 9.940341 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 414 | 436 | 9.004632 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1104 | 1118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1092 | 1121 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09080.4 | - | 0 |
| RefSeq | XP_011015457.1 | PREDICTED: mitogen-activated protein kinase-binding protein 1-like isoform X1 [Populus euphratica] | 0 |
| Q8HXL3 | WD repeat-containing protein 62 OS=Sus scrofa OX=9823 GN=WDR62 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2YLH4 | Mitogen-activated protein kinase-binding protein 1 OS=Populus deltoides OX=3696 GN=H0E87_013013 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14799 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30285450 |
| Apiaceae | Apium graveolens | 1 | Ag5G02363 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G25194 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G09080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022253m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07530.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g058390.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1051 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G1076, Cgl08G1077 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1010s00004.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1069 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006461 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09988 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1767 |
| Salicaceae | Populus euphratica | 1 | populus_peu11401 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132630690 |
| Solanaceae | Solanum chilense | 1 | SOLCI000172200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029641 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4371 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G1795 |