Basic Information
Locus ID:
populus_peu11230
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 6788707 | 6791641 | - | populus_peu11230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 75,424.44 Da | 33.47 | 97.51 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 75 | 116 | 5.4E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 392 | 662 | 6.5E-31 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 276 | 2.93E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 665 | 2.7E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 236 | 6.9E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 280 | 1.5E-5 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 681 | 1.2E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 356 | 463 | 9.3E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 678 | 27.35425 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 369 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_011019962.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK [Populus euphratica] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZYN3 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G078600 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology