Basic Information
Locus ID:
populus_peu11166
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 6170468 | 6174786 | - | populus_peu11166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 44,642.73 Da | 25.85 | 87.62 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 113 | 386 | 3.4E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 88 | 388 | 9.85E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 399 | 1.9E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 191 | 2.0E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 396 | 33.474274 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 236 | 248 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 114 | 145 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17220.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011012976.1 | PREDICTED: probable serine/threonine-protein kinase NAK isoform X1 [Populus euphratica] | 0 |
| Q9SII6 | Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K1ZYA8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G072200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.341 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-13229, nbisL1-mrna-13231 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3717 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16746 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.225 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014961 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-16545, nbisL1-mrna-16546 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14713 |
| Salicaceae | Populus euphratica | 1 | populus_peu11166 |