Basic Information
Locus ID:
populus_peu11132
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 5919214 | 5920987 | - | populus_peu11132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 41,855.43 Da | 51.36 | 90.16 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 68 | 101 | 1.2E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 184 | 385 | 3.92E-26 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 104 | 9.42E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 386 | 5.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 242 | 8.7E-13 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 337 | 362 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 227 | 256 | 0.23 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 257 | 282 | 0.016 | IPR006553 |
| SMART | SM00256 | fbox_2 | 70 | 112 | 8.8E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 363 | 386 | 260.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 201 | 226 | 0.0082 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_011020134.1 | PREDICTED: EIN3-binding F-box protein 1-like [Populus euphratica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZY24 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G068500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology