Basic Information
Locus ID:
populus_peu11084
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 5428708 | 5431980 | + | populus_peu11084 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 73,650.94 Da | 45.31 | 79.01 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 142 | 207 | 4.0E-11 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 585 | 635 | 1.7E-13 | IPR024283 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 414 | 585 | 8.1E-77 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 136 | 211 | 1.13E-13 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 123 | 210 | 5.8E-21 | IPR027417 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 405 | - | - |
| Coils | Coil | Coil | 372 | 392 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_011020216.1 | PREDICTED: translocase of chloroplast 90, chloroplastic isoform X1 [Populus euphratica] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YMR7 | AIG1-type G domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_013285 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology