Basic Information
Locus ID:
populus_peu10998
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 4686273 | 4692285 | - | populus_peu10998 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 74,305.72 Da | 47.92 | 73.71 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 14 | 269 | 3.31186E-137 | - |
| Pfam | PF00069 | Protein kinase domain | 15 | 268 | 1.7E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 300 | 8.63E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 282 | 2.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 94 | 3.1E-23 | - |
| SMART | SM00220 | serkin_6 | 15 | 269 | 4.7E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 269 | 46.463417 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 136 | 148 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 44 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 454 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_011020317.1 | PREDICTED: serine/threonine-protein kinase Nek6-like [Populus euphratica] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2K1ZXC3 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G056300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology