Basic Information
Locus ID:
populus_peu10782
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2735276 | 2747425 | - | populus_peu10782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 114,752.00 Da | 49.99 | 82.89 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 681 | 837 | 5.95286E-59 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 327 | 836 | 2.2E-71 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 40 | 144 | 4.0E-25 | IPR006615 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 162 | 239 | 3.98E-5 | IPR029071 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 325 | 839 | 2.75E-96 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 17 | 144 | 5.62E-27 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 580 | 850 | 6.9E-57 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 10 | 157 | 7.0E-37 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 244 | 2.8E-13 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 313 | 544 | 7.1E-49 | - |
| SMART | SM00695 | dusp | 36 | 147 | 3.6E-32 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 327 | 839 | 52.205635 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 17 | 144 | 18.239075 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 328 | 343 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 781 | 798 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_011040726.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like isoform X1 [Populus euphratica] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U5QKV0 | Ubiquitin carboxyl-terminal hydrolase OS=Populus alba OX=43335 GN=D5086_0000089080 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology