Basic Information
Locus ID:
populus_peu10402
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 41471552 | 41475087 | - | populus_peu10402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 25,886.93 Da | 43.70 | 54.89 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 31 | 165 | 2.03565E-55 | - |
| Pfam | PF01426 | BAH domain | 32 | 144 | 8.3E-24 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 149 | 197 | 3.1E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 139 | 198 | 3.54E-19 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 7 | 141 | 1.2E-31 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 142 | 211 | 2.3E-20 | IPR013083 |
| SMART | SM00249 | PHD_3 | 149 | 196 | 7.1E-10 | IPR001965 |
| SMART | SM00439 | BAH_4 | 30 | 145 | 2.6E-40 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 30 | 145 | 22.841089 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 147 | 198 | 9.0806 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 150 | 195 | - | IPR019786 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_011046991.1 | PREDICTED: LOW QUALITY PROTEIN: BAH and coiled-coil domain-containing protein 1 [Populus euphratica] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z560 | BAH domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_009435 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology