Basic Information
Locus ID:
populus_peu09898
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 36260963 | 36265686 | - | populus_peu09898 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 106,535.57 Da | 40.97 | 85.94 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 57 | 171 | 4.46405E-18 | IPR001480 |
| CDD | cd00028 | B_lectin | 201 | 303 | 1.024E-21 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 650 | 913 | 2.7E-47 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 503 | 531 | 2.2E-4 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 102 | 176 | 1.7E-11 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 232 | 315 | 8.8E-16 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 97 | 176 | 8.38E-20 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 229 | 352 | 1.28E-24 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 915 | 1.09E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 721 | 926 | 2.6E-56 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 192 | 301 | 1.9E-13 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 611 | 720 | 7.9E-27 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 52 | 174 | 1.1E-13 | IPR036426 |
| SMART | SM00220 | serkin_6 | 647 | 915 | 2.5E-35 | IPR000719 |
| SMART | SM00108 | blect_4 | 48 | 174 | 9.3E-9 | IPR001480 |
| SMART | SM00108 | blect_4 | 189 | 303 | 4.3E-17 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 30 | 172 | 14.154198 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 479 | 564 | 7.539302 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 183 | 301 | 14.998173 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 646 | 919 | 35.877052 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 767 | 779 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_011010907.1 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Populus euphratica] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z2A4 | Non-specific serine/threonine protein kinase OS=Populus deltoides OX=3696 GN=H0E87_009017 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology