Basic Information
Locus ID:
populus_peu09794
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 35185415 | 35190099 | + | populus_peu09794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 65,520.40 Da | 44.29 | 74.49 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 406 | 528 | 2.55606E-61 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 98 | 307 | 1.5E-75 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 348 | 574 | 1.4E-72 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 366 | 540 | 1.7E-237 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 106 | 577 | 1.7E-237 | IPR011990 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_011035340.1 | PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Populus euphratica] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2AR83 | ribonuclease P OS=Populus trichocarpa OX=3694 GN=POPTR_004G074100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology