Basic Information
Locus ID:
populus_peu09693
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 34121237 | 34125402 | + | populus_peu09693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 70,494.29 Da | 39.97 | 92.30 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 330 | 365 | 2.7E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 387 | 427 | 3.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 66 | 1.9E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 262 | 283 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 434 | 4.76E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 580 | 650 | 8.7E-14 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 452 | 1.0E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 554 | 651 | 7.8E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 326 | 3.0E-87 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 390 | 413 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 114 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 305 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 115 | 138 | 0.018 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 414 | 437 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 213 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 593 | 652 | 11.495902 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 94 | 116 | 7.373124 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 599 | 621 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 477 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_011043912.1 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z210 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_008833 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology