Basic Information
Locus ID:
populus_peu09331
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 26172597 | 26177060 | + | populus_peu09331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 56,329.44 Da | 46.37 | 72.65 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 403 | 460 | 1.0E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 394 | 462 | 1.44E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 387 | 463 | 1.6E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 402 | 461 | 4.3E-40 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 397 | 462 | 38.985348 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 368 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_011013412.1 | PREDICTED: probable WRKY transcription factor 3 isoform X1 [Populus euphratica] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2ATH3 | WRKY transcription factor 3 OS=Populus trichocarpa OX=3694 GN=POPTR_004G120800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology