Basic Information
Locus ID:
populus_peu09279
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 24354569 | 24361619 | + | populus_peu09279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 24,934.89 Da | 30.62 | 72.72 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 103 | 226 | 1.7E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 227 | 9.02E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 228 | 1.1E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 88 | 6.5E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 90 | 128 | 1.1E-7 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 228 | 22.704163 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28930.3 | protein kinase 1B. | 0 |
| RefSeq | XP_011011764.1 | PREDICTED: protein kinase APK1B, chloroplastic-like isoform X2 [Populus euphratica] | 0 |
| P46573 | Probable serine/threonine-protein kinase PBL10 OS=Arabidopsis thaliana OX=3702 GN=PBL10 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K1XDA2 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G094300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl04520, Sgl09565 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30002050, pistato.v30260720 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2427 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G763200 |
| Poaceae | Zea mays | 1 | Zm00001eb425040_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28051 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG19.868 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012319 |
| Salicaceae | Populus euphratica | 1 | populus_peu09279 |